Gene

rps16

ID
ZDB-GENE-050506-107
Name
ribosomal protein S16
Symbol
rps16 Nomenclature History
Previous Names
  • im:6906552
  • si:dkey-66d18.1 (1)
  • zgc:153404
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to localize to cytosolic small ribosomal subunit. Orthologous to human RPS16 (ribosomal protein S16).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rps16 Human Ortholog
No data available
Associated With rps16 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020574 Small ribosomal subunit protein uS9, conserved site
Family IPR000754 Small ribosomal subunit protein uS9
Homologous_superfamily IPR014721 Small ribosomal subunit protein uS5 domain 2-type fold, subgroup
Homologous_superfamily IPR020568 Ribosomal protein uS5 domain 2-type superfamily
Domain Details Per Protein
Protein Length Ribosomal protein uS5 domain 2-type superfamily Small ribosomal subunit protein uS5 domain 2-type fold, subgroup Small ribosomal subunit protein uS9 Small ribosomal subunit protein uS9, conserved site
UniProtKB:Q1LWH1 146
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rps16-201 (1) Ensembl 531 nt
mRNA rps16-203 (1) Ensembl 1,789 nt
ncRNA rps16-002 (1) Ensembl 873 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations